Collection of Pathway/Genome Databases from the Human Gut

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The GutCyc portal system provides a comprehensive collection of MetaPathways output and extracted Environmental Pathway/Genome Databases (ePGDBs) constructed from environmental sequence information on a global scale and enables new forms of integrated analysis supporting research at the interface of microbial ecology, human health and biological engineering.

A preprint detailing the GutCyc compendium can be found at :

Hahn, Altman, Konwar, et al. GutCyc: a Multi-Study Collection of Human Gut Microbiome Metabolic Models bioRxiv. (2016)